Discover and read the best of Twitter Threads about #Lineages

Most recents (16)

Tracking #SARSCoV2 #Lineages - Globally

Top lineages -#20DayTrends (#G20):

XBB.1.5 (16.5%)⬇️
XBB.1.16 (10.5%)⬆️
XBB.1.9.1 (7.3%)
FL.4 (4%)
EG.1 (3.6%)
XBB.1.16.1 (3.4%)
XBB.1.9.2 (3.2%)
XBB.2.3.2 (2.6%)
FL.2 (2.5%)
FU.1 (2.1%)

public.tableau.com/app/profile/ra…
Updated 6/4/23 Image
Granular details #Global #20DayTrends

This analysis includes all designated #SARSCoV2 sequences submitted to @GISAID with sample collection dates on or after 05/15/2023 (6,574 sequences) Image
In Silico Immune escape and ACE2 receptor binding scores (relative to BA.2)*

Data is intended to prioritize select lineages to generate rapid laboratory experiments to gauge immune escape and ACE2 binding affinity.

[Credits in the legend] *Only Spike RBD mutations considered Image
Read 7 tweets
Tracking #SARSCoV2 #Lineages - Globally

Top lineages -#20DayTrends (#G20):

XBB.1.5 (36.6%)⬇️
XBB.1.9.1 (11.5%)⬆️
EG.1 (4.7%)⬆️
XBB.1.16 (4.4%)⬆️
XBB.1.9.2 (3.1%)
XBB.2.3 (1.8%)
XBB.1.5.13 (1.6%)
XBB.1.16.1 (1.5%)

public.tableau.com/app/profile/ra…

Updated 04/29/23 Image
Granular details #Global #20DayTrends

This analysis includes all designated #SARSCoV2 sequences submitted to @GISAID with sample collection dates on or after 04/09/2023 (14,137 sequences) Image
#USA, #Austria, #France & #Canada have submitted a lion's share of sequences with sample collection dates on or after 04/09/2023 ...followed by #UnitedKingdom, #Australia, #Germany, #Sweden, #SouthKorea, #Singapore, #China, #Spain Image
Read 8 tweets
#VariantDashboard #India - #30DayTrends

Top lineages:
XBB.1.16 (62.6%)
XBB.1.16.1 (9.3%)
XBB.2.3 (6.7%)
XBB.1.16 + NS3_V13L (4.7%)
XBB.2.3.2 (4%)
XBB.1.5 (3.8%)
XBB.1 (1.9%)
XBB.2.3.4 (1.2%)
XBB.2.3.3 (0.9%)
XBB.2.3.5 (0.7%)

Tracker:public.tableau.com/app/profile/ra…
04/18/23 Image
Granular details - #VariantDashboard #India - #30DayTrends

XBB.1.16* (76.7%) is still the dominant variant group in #India, followed by XBB.2.3* (13.5%) Note: Data limited to few States that are sequencing and rapidly submitting data Image
#VariantDashboard #30DayTrends - #Delhi

XBB.1.16 (50.8%)
XBB.1.16+NS3_V13L (11.7%) 👀
XBB.1.16.1 (10.1%)
XBB.2.3 (6.8%)
XBB.2.3.2 (5.6%)
XBB.1.5 (4.5%)
XBB.1.9.1 (3.1%) Image
Read 7 tweets
Tracking #SARSCoV2 #Lineages - Globally

Top lineages -#20DayTrends (#G20):

XBB.1.5 (46.4%)⬇️
XBB.1.9.1 (10.1%)⬆️
XBB.1.16 (4.9%)⬆️
EG.1 (3.7%)⬆️
CH.1.1 (2.3%)⬇️
XBB.1.9.2 (2.3%)
--
XBB.2.3 (1.3%)⬆️

Tracker: public.tableau.com/app/profile/ra…

Updated 04/15/23 Image
Granular details #Global #20DayTrends

This analysis includes all designated #SARSCoV2 sequences submitted to @GISAID with sample collection dates on or after 03/26/2023 (15,505 sequences) Image
#USA, #Austria, #UnitedKingdom & #Canada have submitted a lion's share of sequences with sample collection dates on or after 03/26/2023 ...followed by #Germany, #France, #India, #Italy, #Australia, #Sweden, #Denmark, #Singapore, #SouthKorea, #Spain, #Netherlands Image
Read 7 tweets
#VariantDashboard #India - #30DayTrends

Top lineages:

XBB.1.16 (62%)
XBB.1.16.1 (10.1%)
XBB.2.3 (7.3%)
XBB.1.5 (5.7%)
XBB.2.3.2 (4%)👀
XBB.1 (1.8%)
XBB.1.9.1 (1.7%)
XBB.2.3.4 (1.5%)👀
XBB.2.3.3 (0.9%)
XBB.2.3.5 (0.9%)

Tracker: public.tableau.com/app/profile/ra…

04/13/23 Image
Granular details - #VariantDashboard #India - #30DayTrends

XBB.1.16* (71.1%) is still the dominant variant group in #India, followed by XBB.2.3* (14.6%)

Note: Data limited to few States that are sequencing and rapidly submitting data Image
Tracking #SARSCoV2 lineage XBB.1.16* (#Arcturus) over time in #India

XBB.1.16* sequence count: 1,807

Hotspots: #Gujarat, #Maharashtra, #Delhi, #Karnataka, #TamilNadu, #Haryana, #Goa

Note: Recent Epi-Weeks are incomplete public.tableau.com/app/profile/ra…
Read 4 tweets
#VariantDashboard #India - #30DayTrends

Top circulating lineages:

XBB.1.16 (61%)
XBB.2.3* (15%) 👀
XBB.1.16.1 (10%)👀
XBB.1.5 (6%)
XBB.1 (1.8%)
XBB.1.9.1 (1.8%)

*includes several newly designated XBB.2.3.x

Tracker: public.tableau.com/app/profile/ra…

Updated: 04/12/2023 Image
Granular details - #VariantDashboard #India - #30DayTrends

XBB.1.16* (71%) is still the dominant variant group in #India

Note: Data limited to few States that are sequencing and rapidly submitting data Image
Tracking #SARSCoV2 lineage XBB.1.16* (#Arcturus) over time in #India

XBB.1.16* sequence count: 1,795
XBB.1.6.1 sequence count: 299

Hotspots: #Gujarat, #Maharashtra, #Delhi👀, #Karnataka, #TamilNadu, #Haryana

Note: Recent Epi-Weeks are incomplete

public.tableau.com/app/profile/ra… Image
Read 6 tweets
Tracking #SARSCoV2 #Lineages - Globally

Top lineages -#20DayTrends (#G20):

XBB.1.5 (48.1%)⬆️
XBB.1.9.1 (6.5%)⬆️
CH.1.1 (3.6%)
BQ.1.1 (2.6%)
EG.1 (2.4%)⬆️
CH.1.1.1 (2.1%)
..
XBB.1.16 (1.6%)👀

** includes Spike only seqs

Tracker: public.tableau.com/app/profile/ra…

Updt 03/26/23 Image
Granular details #Global #20DayTrends

This analysis includes all designated #SARSCoV2 sequences submitted to GISAID with sample collection dates on or after 03/06/2023 (25,590 sequences)

Contains many spike sequences from Austria Image
#USA, #UnitedKingdom & #Austria have submitted a lion's share of sequences with sample collection dates on or after 03/06/2023 ...followed by #Canada, #Germany, #Denmark, #Australia, #Italy, #France, #Nertherlands, #India, #Poland Image
Read 7 tweets
Tracking #SARSCoV2 #Lineages - Globally

Top lineages -#20DayTrends (#G20):

BQ.1.1 (18.9%)
XBB.1.5 (18.7%)👀^
CH.1.1 (5.3%)👀
BQ.1 (3.7%)
XBB.1 (2.7%)
BA.5.2.48 (2.3%)
XBF (1.7%)

^more sequences from USA in this period

Tracker: public.tableau.com/app/profile/ra…

Updated 02/02/2023
Granular details #Global #20DayTrends

This analysis includes all designated #SARSCoV2 sequences submitted to GISAID with sample collection dates on or after 01/12/2023
USA has submitted a lion's share of sequences with sample collection dates on or after 01/12/2023 ...followed by #Canada, #UnitedKingdom, #Austria, #Japan, #Denmark, #Germany, #France, #China, #Australia, #Italy
Read 8 tweets
Tracking #SARSCoV2 #Convergent #Lineages ( aka #VariantSoup) over time - Globally | #30DayTrends

BQ.1.1 is currently leading the charts!
Followed by BQ.1, BA.2.75.2*, XBB.1 and BA.2.3.20

Tracker: public.tableau.com/app/profile/ra…

Updated 10/19/2022 7:30 pm
Note: Tracker includes Preselected from Austria and Airport Screening from Japan and USA
Top Lineages with Convergent Mutations-

BQ.1.1
BQ.1
BA.2.75.2
XBB.1
BA.2.3.20
BN.1
BM.1.1.3
BA.2.75.5
BL.1
BQ.1.2
...

3/n
Read 5 tweets
Tracking #SARSCoV2 #Convergent #Lineages ( aka #VariantSoup) over time - Globally | #30DayTrends

BQ.1.1(#Cerberus) is currently leading the charts!
BQ.1 (#Typhon) & BA.2.75.2* (#Chiron) are not far behind!

Tracker: public.tableau.com/app/profile/ra…

Updated 10/13/2022
Note: Tracker includes Preselected (PS) or Airport Screening (AS) from the following countries

BA.2.3.20*:
108 Austria (PS)
11 Japan (AS)

XBB*
17 Austria (PS)
10 Japan (AS)

BQ*
6 Austria (PS)
7 Japan (AS)
7 USA (AS)

BA.2.75*
269 Austria (PS)
21 Japan (AS)
10 USA (AS)

2/n
Granular details - #VariantSoup with Convergent Mutations #30DayTrends

Top Lineages with Convergent Mutations-

BQ.1.1*
BQ.1*
BA.2.75.2*
BM.1.1*
XBB.1*
BN.1*
BA.2.3.20*
BA.2.75.5*
BL.1*
BA.2.75.1*
BY.1*

3/n
Read 7 tweets
Tracking #SARSCoV2 #Convergent #Lineages ( aka #VariantSoup) over time - Globally | #30DayTrends

BQ.1 (#Typhon)/BQ.1.1(#Cerberus) are currently at the top & BA.2.75.2* (#Chiron) is not far behind!

Tracker: public.tableau.com/app/profile/ra…

Updated 10/7/2022 Image
Granular details - #VariantSoup with Convergent Mutations #30DayTrends

BQ.1/BQ.1.1 and BA.2.75.2 are heading the charts!

2/n Image
Tracked #Convergent #lineages are predicted to be immune evasive and bind to host ACE2 receptor better than Omicron.BA2

XBB is most immune evasive
Most BA.2.75* binds better to ACE2 receptors

Closely watched lineages - XBB, BM.1.1.1, CA.1, BQ.1.1, BN.1

3/n Image
Read 12 tweets
Tracking #SARSCoV2 #Convergent #Lineages ( aka #VariantSoup) over time - Globally | #30DayTrends

BQ.1 (#Typhon)/BQ.1.1(#Cerberus) are currently at the top & BA.2.75.2* (#Chiron) is not far behind!

Tracker: public.tableau.com/app/profile/ra…

Updated 10/6/2022
Granular details - #VariantSoup with Convergent Mutations #30DayTrends

BQ.1/BQ.1.1 and BA.2.75.2 are heading the charts!

2/n
Tracked #Convergent #lineages are predicted to be immune evasive and bind to host ACE2 receptor better than Omicron.BA2

XBB is most immune evasive
Most BA.2.75* binds better to ACE2 receptors

Closely watched lineages - XBB, CA.1, BQ.1.1, BN.1, BR.3

3/n
Read 12 tweets
Tracking #SARSCoV2 #Convergent #Lineages** over time - Globally | 10/5/2022

BQ.1 (#Typhon)/BQ.1.1(#Cerberus) is currently at the top & BA.2.75.2* (#Chiron) is not far behind!

public.tableau.com/app/profile/ra…

** aka #VariantSoup #Pentagon #ConvergentQuintet and others in social media Image
Granular details - "Convergent Quintet"

BQ.1/BQ.1.1 and BA.2.75.2 are heading the charts!

2/n Image
Tracked #Convergent #lineages are predicted to be immune evasive and bind to host ACE2 receptor better than Omicron.BA2

XBB is most immune evasive
Most BA.2.75* binds better to ACE2 receptors

Closely watched lineages - XBB, CA.1, BQ.1.1, BN.1, BR.3

3/n Image
Read 10 tweets
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

24.63% BA.2.12.1, <- Spike:L452Q
17.54% BA.2,
14.93% BA.2.9,
12.00% BA.2.12,
11.38% BA.2.10,
9.55% BA.2.3, and
2.35% BA.1.1

Tracker (by State): tinyurl.com/mryj4uu7

#OmicronUpdates 05/01/22
#OmicronVariantUpdates #UnitedStates 05/01/22

Top circulating #sublineages: BA.2.12.1, BA.2*, BA.2.9, BA.2.12, BA.2.10, BA.2.3, and BA.1.1

* includes recently designated BA.2.x.y
Read 5 tweets
1. Officiellement, d'après l'#OMS, il n'existe toujours qu'un unique variant #delta B.1.617.2
Les >200 #lineages (lignages/souches) qui en dérivent ne sont même pas "under investigation".
Ex. : très intéressante vigilance en UK, isn't it?🤨 Image
2. Ainsi en UK on ne trouve plus guère que la souche AY.4, qui a essaimé un peu partout dans le monde.
Comme en #Lituanie où elle s'est déclinée en AY.4.5 mais qui n'est toujours *rien d'autre qu'un delta*.
Or même si comparaison n'est pas raison :
ourworldindata.org/explorers/coro… Image
3. Même si la vaccination est un peu inférieure en Lituanie (surtout chez les + jeunes), a-t-on vraiment l'impression d'avoir affaire au même variant ?
Et aucune mesure spécifique pour les voyageurs en provenance de Lituanie.
La fameuse frontière anti-Tchernobyl & anti AY.4.5🚧 Image
Read 4 tweets
Daily Bookmarks to GAVNet 01/27/2021 greeneracresvaluenetwork.wordpress.com/2021/01/27/dai…
Biden wants to squeeze an extra shot of vaccine out of every Pfizer vial. It won’t be easy.

washingtonpost.com/business/2021/…

#vaccine #distribution #contract
More garbage than water: Serbia promises clean-up of hydro reservoir

reuters.com/article/us-env…

#environment #contamination #CleanUp #sustainability
Read 10 tweets

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